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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1806888 chr7:76008504 C/G UPK3B chr7:76139745-76145838:+ 0.71 5.48 1.27E-6 Box Plot
ACC rs1810499 chr20:45153487 A/G LOC100240726 chr20:45092301-45093931:- 0.67 5.45 1.41E-6 Box Plot
ACC rs1820148 chr5:96252998 A/G ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs1820149 chr5:96307158 T/A ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs182379000 chr8:71612304 A/T XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs183682786 chr7:76335815 G/A POMZP3 chr7:76239303-76256578:- 1.1 5.83 3.57E-7 Box Plot
ACC rs1838095 chr11:60147347 C/T MS4A14 chr11:60146003-60185229:+ 0.35 5.13 4.38E-6 Box Plot
ACC rs1838393 chr8:71702591 G/A XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs1850415 chr6:58660942 A/G GUSBL2 chr6:58246159-58287724:- 0.68 5.57 9.13E-7 Box Plot
ACC rs1860255 chr19:42077072 T/C CEACAM21 chr19:42055886-42093197:+ 0.83 6.8 1.03E-8 Box Plot
ACC rs1883521 chr20:44159798 T/C WFDC3 chr20:44376583-44420571:- 0.87 6.26 7.45E-8 Box Plot
ACC rs1885607 chr6:86394905 A/G SNHG5 chr6:86370668-86388454:- 0.67 5.11 4.63E-6 Box Plot
ACC rs1892 chr11:60161651 T/C MS4A14 chr11:60146003-60185229:+ 0.37 5.44 1.44E-6 Box Plot
ACC rs1894769 chr7:72248621 C/G TYW1B chr7:72023729-72298777:- 1.15 8.63 1.29E-11 Box Plot
ACC rs1894942 chr16:50400087 T/C CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot